Package: FateID 0.2.2
FateID: Quantification of Fate Bias in Multipotent Progenitors
Application of 'FateID' allows computation and visualization of cell fate bias for multi-lineage single cell transcriptome data. Herman, J.S., Sagar, Grün D. (2018) <doi:10.1038/nmeth.4662>.
Authors:
FateID_0.2.2.tar.gz
FateID_0.2.2.zip(r-4.5)FateID_0.2.2.zip(r-4.4)FateID_0.2.2.zip(r-4.3)
FateID_0.2.2.tgz(r-4.4-any)FateID_0.2.2.tgz(r-4.3-any)
FateID_0.2.2.tar.gz(r-4.5-noble)FateID_0.2.2.tar.gz(r-4.4-noble)
FateID_0.2.2.tgz(r-4.4-emscripten)FateID_0.2.2.tgz(r-4.3-emscripten)
FateID.pdf |FateID.html✨
FateID/json (API)
# Install 'FateID' in R: |
install.packages('FateID', repos = c('https://dgrun.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/dgrun/fateid/issues
- intestine - Single-cell transcriptome data of intestinal epithelial cells
Last updated 2 years agofrom:f2ea6f9b49. Checks:OK: 7. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 02 2024 |
R-4.5-win | OK | Nov 02 2024 |
R-4.5-linux | OK | Nov 02 2024 |
R-4.4-win | OK | Nov 02 2024 |
R-4.4-mac | OK | Nov 02 2024 |
R-4.3-win | OK | Nov 02 2024 |
R-4.3-mac | OK | Nov 02 2024 |
Exports:compdrdiffexpnbfateBiasfiltersetgene2genegetFeatgetPartgetsomimpGenesplotdiffgenesnbplotexpressionplotexpressionProfileplotFateMapplotheatmapprcurveprocsomreclassify
Dependencies:askpassclicolorspacefarvergluegtableherejsonlitelabelinglatticelifecyclelocfitMatrixmatrixStatsmunsellopensslpheatmappngprincurveR6randomForestrappdirsRColorBrewerRcppRcppEigenRcppTOMLreticulaterlangrprojrootRSpectraRtsnescalessomsysumapviridisLitewithr